Fitness data for PP_0925 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: Acyl-CoA dehydrogenase; probable dibenzothiophene desulfurization enzyme

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
carbon source 4-Aminobutyric 10 mM (C) -1.2 -2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.1 -2.5 compare
nitrogen source Urea (N) -0.9 -1.9 compare
phage PUT8 MOI 0.1 -0.9 -1.8 compare
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM -0.9 -2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.9 -1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.9 -3.8 compare
temperature shift Temperature shift 10_to_25; with MOPS -0.9 -1.7 compare
stress R2A with Fusaric 120 ug/mL -0.8 -2.6 compare
carbon source Valeric (C) -0.8 -1.8 compare
phage P. put PUT 10 MOI 10 -0.8 -2.1 compare
phage P. putida South MOI 10 -0.8 -1.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.3 compare
carbon source 2-Methylbutanoic (C) +0.7 +2.7 compare
micoeukaryotes C.elegans, mixed culture-2 +0.8 +2.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.8 +2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.9 +1.6 compare
nitrogen source D-2-Aminobutyric (N) +1.0 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.1 +2.3 compare