Fitness data for PP_0912 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: FIG00957368: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.5 -2.5 compare
carbon source carbon source 2-Deoxy-D-glucose 50 mM -0.5 -2.6 compare
carbon source carbon source 4-vinylphenol 0.1 mM -0.5 -2.4 compare
nitrogen source D-2-Aminobutyric (N) -0.5 -1.9 compare
carbon source ferulate (C); with MOPS -0.5 -1.5 compare
nitrogen source no extra (N); with MOPS -0.4 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -2.0 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.4 -2.0 compare
carbon source L-Phenylalanine 5 mM (C) -0.4 -1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.4 -1.7 compare
carbon source Oleic (C) -0.4 -2.5 compare
pH Growth at pH8 and (C) Trisodium citrate -0.4 -1.8 compare
carbon source Lauric (C) +0.4 +2.3 compare
phage P. putida South MOI 0.1 +0.4 +2.4 compare
no stress control Growth with no stress +0.4 +1.8 compare
nitrogen source nitrogen source nitrate 20mM +0.4 +2.0 compare
pH Growth at pH6 and (C) D-Glucose +0.4 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.6 compare
carbon source 3-methyl-1-butanol 0.25 vol% (C) +0.5 +2.0 compare
carbon source Crotonic (C) +0.6 +1.4 compare