Fitness data for PP_0906 in Pseudomonas putida KT2440

putative Multidrug efflux RND transporter
SEED: RND multidrug efflux transporter; Acriflavin resistance protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.3 -2.4 compare
carbon source Trisodium citrate (C) -0.3 -1.7 compare
phage P. putida Sci small MOI 0.1 -0.3 -1.6 compare
temperature Growth at 25C -0.2 -1.5 compare
carbon source Acetate Carbon Source (5mM) -0.2 -1.9 compare
dilutelb LB 0.1x with 55.5 mM D-Glucose -0.2 -1.8 compare
temperature shift Temperature shift 30_to_10; with MOPS +0.2 +1.6 compare
carbon source 3-methyl-1-butanol (C) +0.2 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.2 +1.7 compare
nitrogen source Urea (N); with MOPS +0.2 +1.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.2 +1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X +0.2 +1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.2 +1.5 compare
nitrogen source nitrite (N) +0.3 +1.9 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X +0.3 +2.3 compare
phage P. putida PUT 7 MOI 1 +0.3 +1.9 compare
nitrogen source nitrate (N) +0.3 +1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.3 +2.0 compare
carbon source ferulate (C); with MOPS +0.3 +2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.4 +1.8 compare