Fitness data for PP_0887 in Pseudomonas putida KT2440

Sensor histidine kinase
SEED: Sensor histidine kinase PrrB (RegB) (EC 2.7.3.-)
KEGG: two-component system, sensor histidine kinase RegB

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.1)


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group condition fitness t score  
nitrogen source D-2-Aminobutyric (N) -2.1 -7.1 compare
toxin pUC18_phdP1_pSU18T_docP1 -2.0 -6.9 compare
carbon source Delta-Nonalactone (C) -1.7 -5.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.5 -5.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.4 -5.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.4 -5.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -1.4 -4.0 compare
carbon source Delta-Decalactone (C) -1.3 -4.2 compare
carbon source ferulate (C); with MOPS -1.3 -3.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.2 -3.6 compare
carbon source Delta-Decalactone (C) -1.2 -3.8 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM -1.2 -4.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.2 -3.7 compare
stress Geraniol 1 vol% -1.1 -5.0 compare
micoeukaryotes Tetrahymena sp., Mixed culture-1 -1.1 -4.6 compare
carbon source 2-Methylbutanoic (C) -1.1 -4.8 compare
stress MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL -1.1 -5.5 compare
stress MOPS minimal media_Glucose20mM with Fluoroacetate 80 mM -1.1 -5.0 compare
carbon source Valerolactone (C) -1.1 -3.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.1 -3.8 compare