Fitness data for PP_0870 in Pseudomonas putida KT2440

putative Glycine betaine/carnitine/choline ABC transporter, periplasmic binding protein
SEED: L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1) / Osmotic adaptation
KEGG: osmoprotectant transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
temperature Growth at 30C; with MOPS -1.0 -2.9 compare
phage P. putida Sci Big MOI 0.1 -0.8 -2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.7 -2.4 compare
carbon source 2,3-Butanediol (C) -0.6 -2.6 compare
pH Growth at pH6 and (C) D-Glucose -0.6 -1.6 compare
nitrogen source 2,6-diaminopimelic (N) -0.5 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.5 -1.4 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -1.6 compare
phage P. putida Sci small MOI 0.1 +0.4 +1.4 compare
temperature Growth at 25C +0.4 +2.2 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.4 +1.8 compare
carbon source carbon source 4-vinylphenol 0.01 mM +0.4 +1.4 compare
nitrogen source D-2-Aminobutyric (N) +0.5 +2.0 compare
nitrogen source Ammonium chloride and TNT (N) +0.5 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.6 compare
nitrogen source TNT (N) +0.5 +2.3 compare
pH pH 9 +0.5 +1.4 compare
carbon source carbon source 2-Deoxy-D-glucose 100 mM +0.5 +1.9 compare
pH pH 8 +0.7 +3.2 compare
temperature shift Temperature shift 30_to_21; with MOPS +0.8 +2.9 compare