Fitness data for PP_0841 in Pseudomonas putida KT2440

DNA-binding transcriptional dual regulator 2Fe-2S cluster IscR
SEED: Iron-sulfur cluster regulator IscR
KEGG: Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.2)


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group condition fitness t score  
stress R2A with Fusaric 240 ug/mL -1.9 -3.2 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM -1.8 -2.5 compare
carbon source butyrate (C) -1.7 -2.7 compare
carbon source carbon source 4-vinylphenol 0.1 mM -1.6 -4.1 compare
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -1.6 -3.5 compare
pH Growth at pH6 and (C) D-Glucose -1.5 -1.5 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Phenylalanine 5 mM -1.4 -3.0 compare
pH Growth at pH6 and (C) Trisodium citrate -1.4 -2.3 compare
carbon source butyrate (C) -1.3 -1.6 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM -1.3 -2.7 compare
carbon source 4-Hydroxyvalerate (C) (40mM) -1.3 -2.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.3 -1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.2 -1.8 compare
carbon source carbon source D-Glucose 55.5 mM -1.2 -3.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.2 -1.2 compare
carbon source 1-Pentanol (C) +1.2 +4.4 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 +1.4 +6.2 compare
micoeukaryotes Dictyostellum sp.mixed culture-1 +1.4 +5.7 compare
micoeukaryotes C.elegans, mixed culture-1 +1.5 +8.9 compare
micoeukaryotes C.elegans, mixed culture-2 +1.7 +4.8 compare