Fitness data for PP_0832 in Pseudomonas putida KT2440

S-adenosylmethionine:tRNA ribosyltransferase-isomerase
SEED: S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)
KEGG: S-adenosylmethionine:tRNA ribosyltransferase-isomerase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 2.1)


Add gene:

Or see all 989 experiments or choose conditions

group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -3.7 -2.5 compare
carbon source L-Lysine (C) -3.3 -3.2 compare
temperature shift Temperature shift 30_to_25 -3.2 -2.2 compare
micoeukaryotes Dictyostellum sp.mixed culture-1 -3.2 -5.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -3.1 -4.7 compare
carbon source 3-methyl-1-butanol 0.1 vol% (C) -3.1 -4.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -3.0 -4.6 compare
nitrogen source Beta-alanine (N) -3.0 -7.4 compare
pH Growth at pH6 and (C) Trisodium citrate -2.7 -2.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -2.5 -4.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -2.4 -4.0 compare
micoeukaryotes Dictyostellum sp.mixed culture-2 -2.4 -4.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -2.4 -4.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -2.3 -2.7 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 -2.3 -4.7 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -2.3 -2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -2.1 -4.7 compare
carbon source Delta-Decalactone (C) -2.1 -2.9 compare
nitrogen source Urea (N); with MOPS -2.1 -3.5 compare
phage P. putida South MOI 0.1 +2.2 +8.8 compare