Fitness data for PP_0828 in Pseudomonas putida KT2440

conserved membrane protein of unknown function
SEED: probable membrane protein STY1534
KEGG: putative membrane protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


Add gene:

Or see all 989 experiments or choose conditions

group condition fitness t score  
nitrogen source Ammonium chloride (N) -1.2 -2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.0 -2.7 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.8 -1.6 compare
temperature shift Temperature shift 10_to_30; with MOPS -0.8 -2.9 compare
carbon source Tween 20 (C) -0.8 -2.0 compare
pH Growth at pH7 and (C) Trisodium citrate -0.6 -1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.6 -1.5 compare
carbon source Delta-Undecalactone (C) -0.6 -2.4 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -2.1 compare
temperature shift Temperature shift 10_to_21; with MOPS +0.5 +2.5 compare
pH Growth at pH9 and (C) Trisodium citrate +0.5 +2.0 compare
carbon source ferulate (C); with MOPS +0.5 +1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.5 +2.1 compare
carbon source acetate (C) +0.6 +1.6 compare
temperature shift Temperature shift 30_to_21; with MOPS +0.6 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.6 +1.6 compare
carbon source 3-methyl-1-butanol 0.25 vol% (C) +0.6 +1.5 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v dodecane overlay +0.6 +2.5 compare
pH Valerolactone (C) pH 6.5 +0.6 +2.0 compare
carbon source D-Glucose (C) +0.6 +2.4 compare