Fitness data for PP_0827 in Pseudomonas putida KT2440

putative phosphonate transport system permease protein PtxC
SEED: Phosphonate ABC transporter permease protein phnE1 (TC 3.A.1.9.1)
KEGG: phosphonate transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
pH Growth at pH6 and (C) D-Glucose -2.5 -1.4 compare
no stress control Growth with no stress -1.6 -1.3 compare
carbon source p-Coumaric (C) -1.6 -3.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -1.5 -2.3 compare
pH Growth at pH6 and (C) Trisodium citrate -1.2 -2.0 compare
microaerobic m9 microaerobic M9 -1.1 -2.5 compare
nitrogen source nitrate (N) -1.1 -1.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -1.1 -1.4 compare
pH Growth at pH7 and (C) Trisodium citrate -1.1 -1.5 compare
phage P. putida Sci small MOI 0.1 -1.0 -1.1 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.0 -2.3 compare
reactor 24hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 1g/hr dextrose, set to 30% DO. -1.0 -2.0 compare
stress Growth with Chloride 200 mM; with MOPS -1.0 -1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.0 -1.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.9 -0.9 compare
nitrogen source Ammonium chloride (N) +0.9 +2.1 compare
nitrogen source D-2-Aminobutyric (N) +1.0 +1.5 compare
pH pH 4 +1.0 +1.5 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.1 +0.9 compare
pH pH 8 +1.2 +1.8 compare