Fitness data for PP_0824 in Pseudomonas putida KT2440

phosphonate transport system-binding protein
SEED: Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)
KEGG: phosphonate transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source Valerolactone (C) -1.5 -3.1 compare
nitrogen source D-2-Aminobutyric (N) -1.4 -3.1 compare
nitrogen source NAG (N); with MOPS -1.3 -2.2 compare
stress Growth with Chloride 500 mM; with MOPS -1.0 -2.8 compare
temperature shift Temperature shift 10_to_30; with MOPS -0.7 -2.2 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM -0.7 -2.3 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM -0.7 -1.8 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v oleyl alcohol overlay -0.6 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.6 -2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.6 -2.4 compare
r2a control R2A control -0.6 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.6 -2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5 +2.2 compare
nitrogen source nitrogen source nitrate 20mM +0.5 +2.2 compare
carbon source L-Phenylalanine 5 mM (C) +0.6 +2.8 compare
nitrogen source nitrogen source nitrite 0.5mM +0.6 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.7 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +2.6 compare
nitrogen source 2,6-diaminopimelic (N) +0.7 +1.5 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 +0.9 +2.5 compare