Fitness data for PP_0822 in Pseudomonas putida KT2440

tRNA 2-selenouridine synthase
SEED: Selenophosphate-dependent tRNA 2-selenouridine synthase
KEGG: tRNA 2-selenouridine synthase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
temperature Growth at 30C; with MOPS -0.7 -2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.6 -2.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.6 -2.1 compare
pH Growth at pH9 and (C) Trisodium citrate -0.6 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -3.4 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 -2.2 compare
phage P. put South MOI 10 -0.5 -1.9 compare
stress Growth with Chloride 500 mM; with MOPS -0.5 -2.1 compare
nitrogen source nitrogen source nitrate 5mM -0.5 -2.2 compare
carbon source Acetate Carbon Source (5mM) -0.5 -2.9 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -2.4 compare
temperature Growth at 25C; with MOPS -0.4 -2.4 compare
temperature shift Temperature shift 10_to_30; with MOPS -0.4 -2.0 compare
carbon source Acetate Carbon Source (20mM) -0.4 -2.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.4 -1.8 compare
nitrogen source 2,6-diaminopimelic (N) +0.5 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.5 +2.4 compare
nitrogen source D-2-Aminobutyric (N) +0.5 +2.2 compare
carbon source Delta-Nonalactone (C) +0.5 +3.6 compare
nitrogen source D-2-Aminobutyric (N) +0.7 +2.2 compare