Fitness data for PP_0737 in Pseudomonas putida KT2440

lipid A 3-O-deacylase
SEED: Lipid A 3-O-deacylase
KEGG: lipid A 3-O-deacylase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
micoeukaryotes Tetrahymena sp., Mixed culture-1 -1.1 -3.9 compare
carbon source Valerolactone (C) -1.0 -2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -1.0 -2.2 compare
temperature shift Temperature shift 10_to_25; with MOPS -0.9 -1.9 compare
nitrogen source NAG (N); with MOPS -0.9 -1.2 compare
pH Growth at pH8 and (C) D-Glucose -0.8 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.8 -2.0 compare
pH Growth at pH8 and (C) Trisodium citrate -0.8 -2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.7 -1.1 compare
carbon source carbon source Bisabolol 45 mM +0.7 +2.1 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.7 +2.5 compare
pH pH 4 +0.8 +1.4 compare
carbon source carbon source 2-Deoxy-D-glucose 50 mM +0.8 +2.1 compare
carbon source carbon source 3-O-methyl-glucose 10 mM +0.8 +2.1 compare
carbon source Valeric (C) +0.8 +2.5 compare
pH pH 9 +0.9 +1.9 compare
pH pH 6 +1.0 +2.3 compare
phage P. putida Sci small MOI 0.1 +1.0 +4.4 compare
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM +1.1 +3.5 compare
carbon source carbon source 4-vinylphenol 0.01 mM +1.1 +2.0 compare