Fitness data for PP_0728 in Pseudomonas putida KT2440

conserved protein of unknown function

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
nitrogen source D-2-Aminobutyric (N) -0.5 -2.5 compare
phage P. putida PUT 7 MOI 1 -0.4 -2.2 compare
phage P. putida Sci Big MOI 0.1 -0.3 -1.8 compare
pH Growth at pH6 and (C) Trisodium citrate -0.3 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.2 -1.5 compare
carbon source L-Lysine (C) -0.2 -1.7 compare
temperature shift Temperature shift 30_to_34; with MOPS +0.2 +1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs +0.2 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.2 +1.6 compare
pH Growth at pH6 and (C) Trisodium citrate +0.2 +1.7 compare
carbon source carbon source 4-vinylphenol 0.01 mM +0.3 +1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.3 +1.6 compare
pH Growth at pH8 and (C) D-Glucose +0.3 +2.1 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.3 +1.7 compare
pH pH 8 +0.3 +1.7 compare
carbon source carbon source Glycerol 108.6 mM +0.3 +2.0 compare
pH pH 5 +0.3 +1.9 compare
stress Growth with Chloride 500 mM +0.3 +2.1 compare
nitrogen source Propandiamine (N) +0.3 +2.1 compare
pH Growth at pH7 and (C) D-Glucose +0.3 +2.2 compare