Fitness data for PP_0621 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: FIG00953647: hypothetical protein
KEGG: uncharacterized protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
carbon source Vanillin (C) -1.5 -3.4 compare
carbon source Vanillin (C) -1.5 -5.2 compare
carbon source Vanillin (C) -1.5 -4.8 compare
reactor 40hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 2.15g/hr dextrose, set to 30% DO. -1.4 -3.3 compare
nitrogen source NAG (N); with MOPS -1.1 -1.3 compare
carbon source Valeric (C) -1.1 -1.6 compare
carbon source 1,3-Hexanediol (C) -1.1 -2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.0 -2.4 compare
carbon source 1,4-Butanediol (C) -1.0 -3.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -1.0 -2.4 compare
carbon source carbon source D-Glucose 55.5 mM -0.9 -1.6 compare
carbon source carbon source 4-vinylphenol 0.01 mM -0.9 -2.7 compare
pH D-Glucose (C) pH 7 -0.9 -2.5 compare
carbon source 3-methyl-1-butanol 0.1 vol% (C) -0.9 -2.5 compare
phage P. putida Sci Big MOI 0.1 -0.8 -2.1 compare
carbon source Vanillin (C) -0.8 -3.3 compare
nitrogen source 2,6-diaminopimelic (N) +0.8 +2.3 compare
carbon source D-Glucose (C) +0.8 +2.2 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +1.0 +2.6 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.2 +2.2 compare