Fitness data for PP_0615 in Pseudomonas putida KT2440

Branched-chain amino acid ABC transporter, ATP-binding protein
SEED: Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1)
KEGG: branched-chain amino acid transport system ATP-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.9 -3.5 compare
carbon source ferulate (C); with MOPS -0.7 -2.3 compare
pH Growth at pH6 and (C) Trisodium citrate -0.6 -1.9 compare
temperature shift Temperature shift 30_to_10; with MOPS -0.6 -2.2 compare
stress Growth with Chloride 200 mM; with MOPS -0.6 -1.9 compare
reactor 40hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 2.15g/hr dextrose, set to 30% DO. -0.6 -2.6 compare
carbon source Nonanoic (C) -0.5 -2.1 compare
stress R2A with Fusaric 240 ug/mL -0.5 -2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.5 -2.0 compare
pH Growth at pH6 and (C) Trisodium citrate -0.5 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -2.5 compare
stress Growth with Chloride 500 mM; with MOPS +0.5 +2.1 compare
pH Growth at pH6 and (C) D-Glucose +0.5 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days +0.5 +1.9 compare
nitrogen source D-2-Aminobutyric (N) +0.5 +1.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.6 +1.8 compare
nitrogen source Hydantoin (N) +0.7 +2.6 compare
nitrogen source Hydantoin (N) +0.7 +3.2 compare
nitrogen source Hydantoin (N) +1.8 +4.7 compare
nitrogen source Hydantoin (N) +2.5 +5.1 compare