Fitness data for PP_0611 in Pseudomonas putida KT2440

Type IV pili biogenesis protein PilE
SEED: Type IV pilus biogenesis protein PilE
KEGG: type IV pilus assembly protein PilE

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
carbon source ferulate (C); with MOPS -1.7 -3.1 compare
carbon source ferulate (C); with MOPS -1.7 -4.4 compare
carbon source 2,3-Butanediol (C) -1.5 -5.9 compare
pH Growth at pH7 and (C) D-Glucose -1.3 -2.6 compare
carbon source 2,3-Butanediol (C) -1.1 -3.2 compare
phage P. put South MOI 10 -0.8 -2.7 compare
carbon source 1,3-Butandiol (C) -0.8 -3.1 compare
carbon source ferulate (C); with MOPS -0.8 -2.0 compare
pH Growth at pH6 and (C) Trisodium citrate -0.8 -1.8 compare
stress R2A with Polymyxin B sulfate 0.001 mg/ml -0.7 -3.6 compare
stress R2A with Fusaric 240 ug/mL -0.6 -1.9 compare
phage PUT 8 MOI 1 -0.6 -1.6 compare
carbon source 2-Keto-D-gluconic hemicalcium salt (C) -0.6 -3.0 compare
phage P. putida Sci small MOI 0.1 -0.6 -1.5 compare
stress Growth with Chloride 500 mM -0.6 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +1.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.8 +2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.9 +2.6 compare