Fitness data for PP_0571 in Pseudomonas putida KT2440

conserved membrane protein of unknown function

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
phage P. putida Missley MOI 0.1 -0.7 -3.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.6 -2.7 compare
phage P. putida Sci small MOI 0.1 -0.6 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -2.4 compare
r2a control with 0.2% methanol R2A control with 0.2% methanol -0.5 -3.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -2.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.4 -2.3 compare
phage P. putida Sci Big MOI 0.1 -0.4 -1.7 compare
stress R2A with Fusaric 240 ug/mL -0.4 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.4 -1.7 compare
temperature shift Temperature shift 30_to_34 -0.4 -2.1 compare
carbon source D-Glucose (C) 10 mM -0.4 -2.3 compare
phage P. putida compost MOI 0.1 -0.4 -2.5 compare
carbon source Vanillin (C) -0.3 -2.3 compare
carbon source 3-methyl-2-oxopentanoic (C) -0.3 -2.3 compare
nitrogen source nitrite (N) -0.3 -1.4 compare
pH Growth at pH6 and (C) D-Glucose +0.3 +1.5 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. +0.3 +1.9 compare
pH Growth at pH7 and (C) Trisodium citrate +0.4 +1.3 compare