Fitness data for PP_0567 in Pseudomonas putida KT2440

Biosynthetic arginine decarboxylase
SEED: Biosynthetic arginine decarboxylase (EC 4.1.1.19)
KEGG: arginine decarboxylase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
nitrogen source Propandiamine (N) -5.6 -10.8 compare
nitrogen source Propandiamine (N) -5.3 -11.4 compare
carbon source 3-methyl-1-butanol 0.1 vol% (C) -1.2 -5.8 compare
carbon source Decanoic (C) -1.2 -7.8 compare
carbon source 1-Pentanol (C) -1.0 -6.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.9 -3.5 compare
supernatant LB 0.1x with 55.5 mM D-Glucose with Supernatant: Acinetobacter -0.9 -6.7 compare
nitrogen source L-Arginine (N) -0.8 -6.0 compare
carbon source Delta-Nonalactone (C) -0.7 -4.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.7 -3.9 compare
nitrogen source L-Arginine (N) -0.7 -5.0 compare
carbon source Delta-Decalactone (C) -0.7 -4.0 compare
dilutelb LB 0.1x with 55.5 mM D-Glucose -0.7 -4.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.6 -3.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.6 -2.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.6 -4.3 compare
stress R2A with Fusaric 240 ug/mL -0.6 -3.6 compare
stress Growth with Chloride 500 mM; with MOPS -0.6 -2.9 compare
nitrogen source D-2-Aminobutyric (N) +0.9 +3.9 compare
nitrogen source D-2-Aminobutyric (N) +0.9 +4.5 compare