Fitness data for PP_0512 in Pseudomonas putida KT2440

hypothetical protein
SEED: Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.2)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -5.1 -3.1 compare
temperature shift Temperature shift 30_to_34; with MOPS -4.3 -2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -2.5 -2.1 compare
pH Growth at pH6 and (C) D-Glucose -2.2 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -2.2 -1.5 compare
nitrogen source 2,6-diaminopimelic (N) -2.2 -1.9 compare
carbon source acetate (C) -2.2 -2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -2.0 -2.3 compare
temperature Growth at 25C -1.8 -1.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -1.7 -2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.5 -1.4 compare
carbon source 3-Hydroxydecanoic (C) -1.5 -1.9 compare
pH Growth at pH9 and (C) Trisodium citrate -1.5 -1.1 compare
carbon source 5-Aminovaleric 10 mM (C) -1.4 -1.9 compare
temperature Growth at 34C -1.3 -0.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.3 -2.2 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.2 -1.3 compare
nitrogen source NAG (N); with MOPS +1.4 +3.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.5 +1.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +1.5 +3.0 compare