Fitness data for PP_0508 in Pseudomonas putida KT2440

conserved exported protein of unknown function

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.2)


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group condition fitness t score  
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM -4.1 -2.8 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM -3.6 -4.2 compare
stress Growth with Chloride 200 mM; with MOPS -3.4 -2.4 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM -2.8 -3.8 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -2.3 -2.7 compare
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -2.1 -2.6 compare
carbon source L-tyrosine 5 mM (C) -2.1 -3.7 compare
carbon source carbon source Bisabolene 48.9 mM -2.0 -1.7 compare
pH pH 8 -1.7 -1.8 compare
carbon source carbon source D-Glucose 55.5 mM -1.6 -1.7 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -1.6 -2.4 compare
pH Growth at pH7 and (C) D-Glucose -1.5 -0.8 compare
stress MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL -1.3 -1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -1.2 -2.2 compare
pH Valerolactone (C) pH 6.5 -1.2 -1.4 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM -1.2 -2.5 compare
carbon source carbon source 3-O-methyl-glucose 50 mM -1.2 -1.1 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.3 +1.8 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.4 +1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +2.0 +1.5 compare