Fitness data for PP_0358 in Pseudomonas putida KT2440

conserved membrane protein of unknown function
SEED: Protein rarD
KEGG: chloramphenicol-sensitive protein RarD

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM -1.3 -6.5 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM -1.0 -5.4 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM -1.0 -5.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -3.3 compare
nitrogen source NAG (N); with MOPS -0.5 -1.5 compare
stress MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL -0.5 -2.4 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM -0.5 -2.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.5 -2.3 compare
nitrogen source nitrite (N) -0.4 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -2.5 compare
carbon source acetate (C) -0.4 -1.5 compare
pH Growth at pH9 and (C) D-Glucose -0.4 -2.3 compare
stress MOPS minimal media_Glucose20mM with Chloride 200 mM -0.4 -2.4 compare
nitrogen source nitrate (N) -0.4 -1.8 compare
carbon source D-Lysine 10 mM (C) -0.4 -2.2 compare
carbon source carbon source 4-vinylphenol 0.01 mM +0.4 +1.8 compare
temperature shift Temperature shift 10_to_34; with MOPS +0.4 +2.4 compare
pH pH 9 +0.4 +2.0 compare
carbon source carbon source 3-O-methyl-glucose 50 mM +0.5 +2.2 compare
carbon source carbon source 2-Deoxy-D-glucose 100 mM +0.5 +2.4 compare