Fitness data for PP_0328 in Pseudomonas putida KT2440

formaldehyde dehydrogenase
SEED: Threonine dehydrogenase and related Zn-dependent dehydrogenases
KEGG: glutathione-independent formaldehyde dehydrogenase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source 3-methyl-1-butanol 0.1 vol% (C) -1.0 -4.9 compare
carbon source carbon source 4-vinylphenol 0.1 mM -0.6 -3.1 compare
micoeukaryotes Tetrahymena sp., Mixed culture-1 -0.5 -2.5 compare
temperature shift Temperature shift 10_to_21; with MOPS -0.5 -3.2 compare
temperature shift Temperature shift 30_to_10; with MOPS -0.5 -2.3 compare
carbon source Vanillin (C) -0.4 -2.3 compare
carbon source D-Glucose (C); with MOPS -0.4 -1.8 compare
no stress control Growth with no stress -0.4 -1.5 compare
stress Growth with Chloride 500 mM; with MOPS -0.4 -1.9 compare
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM -0.4 -2.1 compare
phage PUT8 MOI 0.1 -0.4 -1.7 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.4 -2.2 compare
carbon source carbon source 2-Deoxy-D-glucose 10 mM -0.4 -2.3 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v oleyl alcohol overlay -0.4 -2.1 compare
carbon source D-Glucose (C) -0.4 -1.5 compare
carbon source ferulate (C); with MOPS -0.4 -1.7 compare
carbon source acetate (C) -0.4 -1.3 compare
nitrogen source NAG (N); with MOPS +0.4 +1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.4 +2.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +2.8 compare