Fitness data for PP_0316 in Pseudomonas putida KT2440

putative glycine-betaine dioxygenase subunit
SEED: GbcB Glycine betaine demethylase subunit B

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
nitrogen source Carnitine Hydrochloride (N) -3.1 -9.6 compare
nitrogen source Carnitine Hydrochloride (N) -2.9 -9.7 compare
nitrogen source Choline chloride (N) -1.8 -7.1 compare
nitrogen source Choline chloride (N) -1.7 -8.7 compare
carbon source Cholinium lysinate (C) -1.2 -6.8 compare
nitrogen source Betaine (N) -1.1 -5.1 compare
nitrogen source Betaine (N) -0.9 -4.4 compare
temperature Growth at 30C; with MOPS -0.8 -1.8 compare
temperature shift Temperature shift 10_to_25; with MOPS -0.7 -1.8 compare
carbon source Valeric (C) -0.6 -2.0 compare
nitrogen source nitrite (N) -0.6 -2.1 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.5 -2.3 compare
stress MOPS minimal media_Glucose20mM with Fluoroacetate 80 mM +0.5 +2.5 compare
nitrogen source 2,6-diaminopimelic (N) +0.5 +2.2 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. +0.5 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +3.1 compare
stress Growth with Chloride 500 mM +0.6 +2.9 compare
nitrogen source NAG (N); with MOPS +0.6 +1.7 compare
pH Valerolactone (C) pH 6.5 +0.7 +2.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9 +1.6 compare