Fitness data for PP_0240 in Pseudomonas putida KT2440

Aliphatic sulfonates import ATP-binding protein SsuB
SEED: Alkanesulfonates ABC transporter ATP-binding protein / Sulfonate ABC transporter, ATP-binding subunit SsuB
KEGG: sulfonate/nitrate/taurine transport system ATP-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.0)


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group condition fitness t score  
nitrogen source nitrogen source nitrite 1mM -2.0 -1.4 compare
reactor 48hr timepoint of 1L M9/1% dextrose DISCONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat set to 10% DO. -1.9 -3.4 compare
temperature Growth at 25C -1.7 -1.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -1.4 -2.5 compare
temperature shift Temperature shift 10_to_25; with MOPS -1.4 -2.3 compare
nitrogen source 2,6-diaminopimelic (N) -1.3 -2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -1.2 -2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -1.2 -1.0 compare
carbon source Valerolactam 10 mM (C) -1.1 -2.8 compare
phage P. putida PUT 7 MOI 1 -1.1 -1.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.0 -1.5 compare
carbon source D-Glucose (C) -1.0 -2.9 compare
temperature shift Temperature shift 10_to_25; with MOPS +1.0 +1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.0 +1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +1.1 +0.9 compare
carbon source ferulate (C); with MOPS +1.1 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.2 +1.5 compare
temperature Growth at 25C; with MOPS +1.3 +4.1 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.8 +2.2 compare
nitrogen source D-2-Aminobutyric (N) +2.3 +2.2 compare