Fitness data for PP_0237 in Pseudomonas putida KT2440

aliphatic sulfonate ABC transporter - periplasmic binding protein / transport of isethionate
SEED: Alkanesulfonates-binding protein
KEGG: sulfonate/nitrate/taurine transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
nitrogen source nitrogen source Ammonium chloride 20mM -1.7 -7.0 compare
nitrogen source nitrogen source nitrate 20mM -0.6 -3.2 compare
carbon source carbon source 2-Deoxy-D-glucose 10 mM -0.6 -2.9 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.6 -2.4 compare
nitrogen source nitrogen source nitrate 20mM -0.6 -2.1 compare
nitrogen source nitrogen source nitrite 0.5mM -0.5 -1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.5 -2.5 compare
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM -0.5 -1.8 compare
carbon source carbon source 2-Deoxy-D-glucose 100 mM -0.5 -2.2 compare
carbon source Tween 20 (C) -0.5 -1.8 compare
carbon source carbon source Glycerol 108.6 mM -0.5 -2.3 compare
pH pH 5 -0.5 -1.7 compare
pH pH 6 -0.5 -2.3 compare
stress R2A with Fusaric 480 ug/mL +0.4 +2.0 compare
phage P. putida Sci Big MOI 0.1 +0.4 +1.6 compare
carbon source Valerolactone (C) +0.5 +1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.5 +1.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.5 +2.1 compare
nitrogen source nitrogen source nitrite 1mM +0.5 +2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.6 +2.3 compare