Fitness data for PP_0233 in Pseudomonas putida KT2440

taurine ABC transporter periplasmic binding subunit
SEED: Taurine-binding periplasmic protein TauA
KEGG: sulfonate/nitrate/taurine transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
temperature shift Temperature shift 10_to_25; with MOPS -0.6 -2.3 compare
temperature shift Temperature shift 30_to_25 -0.6 -2.4 compare
carbon source D-Glucose (C) -0.6 -1.4 compare
temperature Growth at 25C; with MOPS -0.5 -2.8 compare
nitrogen source Urea (N) -0.5 -1.6 compare
carbon source L-Proline (C) -0.5 -2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.5 -1.6 compare
nitrogen source DL-2-Aminobutyric (N) -0.5 -2.7 compare
pH Growth at pH8 and (C) Trisodium citrate -0.5 -2.3 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 +0.5 +1.3 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.5 +1.5 compare
carbon source D-Glucose (C) +0.5 +1.9 compare
carbon source Ethyl decanoate and D-Glucose (C)s +0.5 +2.4 compare
no phage control Time6-nophage +0.5 +3.1 compare
carbon source 3-methyl-1-butanol 0.25 vol% (C) +0.5 +2.4 compare
carbon source 3-methyl-1-butanol 0.1 vol% (C) +0.6 +3.0 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days +0.7 +2.1 compare
nitrogen source 2,6-diaminopimelic (N) +0.8 +2.7 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9 +2.2 compare