Fitness data for PP_0229 in Pseudomonas putida KT2440

choline/carnitine/betaine transporter
SEED: High-affinity choline uptake protein BetT
KEGG: high-affinity choline transport protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
phage P. putida Sci Big MOI 0.1 -0.9 -3.9 compare
pH Growth at pH6 and (C) D-Glucose -0.5 -1.8 compare
phage P. putida Missley MOI 0.1 -0.4 -1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.4 -1.7 compare
temperature shift Temperature shift 10_to_25 -0.4 -2.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.4 -1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.4 -1.6 compare
temperature Growth at 30C; with MOPS -0.4 -1.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.4 -1.8 compare
phage P. putida South MOI 10 -0.3 -2.2 compare
temperature shift Temperature shift 30_to_34 -0.3 -2.4 compare
stress Growth with Chloride 500 mM; with MOPS -0.3 -1.6 compare
pH Growth at pH6 and (C) D-Glucose -0.3 -1.2 compare
stress NaCl stress 250 mM -0.3 -1.8 compare
carbon source butyrate (C) +0.3 +1.5 compare
pH Growth at pH6 and (C) Trisodium citrate +0.3 +1.8 compare
carbon source D-Glucose (C); with MOPS +0.3 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.4 +1.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.8 compare
carbon source Rhamnogalacturonan - from potato (C) +0.4 +2.4 compare