Fitness data for PP_0216 in Pseudomonas putida KT2440

putative sensory box/GGDEF family protein
SEED: Sensory box/GGDEF family protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
phage P. putida PUT 7 MOI 1 -0.6 -2.4 compare
nitrogen source NAG (N); with MOPS -0.5 -1.7 compare
phage P. putida Sci small MOI 0.1 -0.5 -1.8 compare
pH Growth at pH7 and (C) D-Glucose -0.4 -1.6 compare
phage P. putida Missley MOI 0.1 -0.4 -2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.3 -1.9 compare
phage P. putida compost MOI 0.1 -0.3 -2.5 compare
phage P. putida Sci Big MOI 0.1 -0.3 -1.5 compare
carbon source Tween 20 (C) -0.3 -1.5 compare
nitrogen source nitrogen source nitrate 20mM -0.3 -1.9 compare
carbon source carbon source 2-Deoxy-D-glucose 100 mM +0.3 +1.8 compare
carbon source ferulate (C); with MOPS +0.3 +1.4 compare
pH Growth at pH6 and (C) Trisodium citrate +0.4 +1.9 compare
stress Growth with Chloride 500 mM; with MOPS +0.4 +2.3 compare
nitrogen source nitrate (N) +0.4 +2.1 compare
carbon source carbon source Bisabolene 48.9 mM +0.4 +1.9 compare
pH pH 5 +0.4 +2.1 compare
carbon source 4-Aminobutyric 10 mM (C) +0.5 +2.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.5 +2.5 compare