Fitness data for PP_0208 in Pseudomonas putida KT2440

putative Nitrate ABC transporter, permease protein
KEGG: sulfonate/nitrate/taurine transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
phage P. putida Sci small MOI 0.1 -0.8 -2.8 compare
phage P. putida PUT 7 MOI 1 -0.7 -3.6 compare
phage P. putida Missley MOI 0.1 -0.4 -2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.4 -2.1 compare
phage PUT8 MOI 10 -0.4 -2.2 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.4 -1.8 compare
carbon source Lignin Monomers (C) -0.4 -2.3 compare
pH Valerolactone (C) pH 6.5 -0.3 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.3 +1.9 compare
nitrogen source Caprolactam (N) +0.3 +2.3 compare
carbon source D-Glucose (C); with MOPS +0.3 +2.0 compare
pH pH 5 +0.4 +1.9 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. +0.4 +2.6 compare
carbon source carbon source 2-Deoxy-D-glucose 10 mM +0.4 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.8 compare
carbon source carbon source 2-Deoxy-D-glucose 50 mM +0.4 +2.1 compare
pH pH 4 +0.5 +2.4 compare
carbon source carbon source 2-Deoxy-D-glucose 100 mM +0.5 +2.4 compare
pH pH 8 +0.5 +2.5 compare
carbon source carbon source 3-O-methyl-glucose 50 mM +0.7 +3.3 compare