Fitness data for PP_0207 in Pseudomonas putida KT2440

putative Nitrate ABC transporter, periplasmic nitrate-binding protein
KEGG: sulfonate/nitrate/taurine transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
phage P. putida Missley MOI 0.1 -0.6 -2.9 compare
nitrogen source Urea (N) -0.6 -2.6 compare
phage P. putida Sci small MOI 0.1 -0.5 -2.2 compare
carbon source Trisodium citrate (C) -0.5 -2.0 compare
phage P. putida Sci small MOI 0.1 -0.5 -1.9 compare
temperature shift Temperature shift 30_to_25 -0.5 -2.1 compare
phage P. putida Sci Big MOI 0.1 -0.5 -2.5 compare
temperature Growth at 25C -0.4 -2.0 compare
temperature shift Temperature shift 10_to_30 -0.4 -2.8 compare
carbon source ferulate (C); with MOPS -0.4 -1.6 compare
pH D-Glucose (C) pH 6 -0.4 -2.3 compare
carbon source Valerolactone (C) -0.4 -1.7 compare
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v dodecane overlay -0.4 -2.3 compare
pH Growth at pH7 and (C) D-Glucose -0.3 -1.5 compare
temperature shift Temperature shift 30_to_10; with MOPS -0.3 -2.1 compare
carbon source carbon source 4-vinylphenol 0.01 mM +0.4 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.5 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.4 +1.9 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 +1.8 compare