Fitness data for PP_0204 in Pseudomonas putida KT2440

Transcriptional regulator, GntR family
SEED: Putative alkanesulfonate metabolism utilization regulator
KEGG: GntR family transcriptional regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
stress R2A with Fusaric 240 ug/mL -1.1 -4.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.8 -2.2 compare
phage P. put South MOI 10 -0.8 -2.1 compare
phage P. putida PUT 7 MOI 1 -0.7 -1.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.7 -1.9 compare
nitrogen source D-2-Aminobutyric (N) -0.7 -1.2 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.7 -1.9 compare
nitrogen source 2,6-diaminopimelic (N) -0.7 -1.1 compare
carbon source 1,3-Butandiol (C) -0.7 -1.3 compare
nitrogen source DL-3-Aminoisobutyric (N) -0.7 -2.5 compare
phage P. putida Sci Big MOI 0.1 -0.7 -1.7 compare
carbon source ferulate (C); with MOPS +0.7 +1.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days +0.7 +2.1 compare
pH Growth at pH6 and (C) D-Glucose +0.7 +1.5 compare
temperature shift Temperature shift 30_to_10 +0.7 +3.0 compare
carbon source 3-Hydroxydecanoic (C) +0.7 +2.6 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +2.1 compare
carbon source ferulate (C); with MOPS +0.8 +1.7 compare
stress Geraniol 1 vol% +0.8 +3.0 compare
nitrogen source Propandiamine (N) +0.9 +3.7 compare