Fitness data for PP_0125 in Pseudomonas putida KT2440

putative cytochrome c-type protein
SEED: Cytochrome c5

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.6)


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group condition fitness t score  
carbon source ferulate (C); with MOPS -3.8 -3.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -3.3 -3.6 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -3.1 -3.6 compare
nitrogen source NAG (N); with MOPS -2.9 -2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -2.5 -2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -2.5 -2.9 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -2.1 -2.7 compare
carbon source L-Lysine (C) -2.1 -2.6 compare
carbon source 3-methyl-1-butanol 0.1 vol% (C) -2.0 -5.9 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.9 -2.0 compare
micoeukaryotes C.elegans, mixed culture-1 -1.8 -2.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.7 -2.6 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.7 -2.4 compare
carbon source carbon source 2-Deoxy-D-glucose 100 mM -1.7 -2.9 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM -1.7 -2.3 compare
carbon source carbon source 4-vinylphenol 0.01 mM -1.7 -2.4 compare
carbon source carbon source 3-O-methyl-glucose 10 mM -1.6 -2.4 compare
carbon source Valerolactone (C) -1.6 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -1.6 -2.3 compare
carbon source D-Glucose (C) -1.6 -1.5 compare