Fitness data for PP_0105 in Pseudomonas putida KT2440

Cytochrome C oxidase assembly protein
SEED: Cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1
KEGG: cytochrome c oxidase subunit XI assembly protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.4 -4.1 compare
carbon source 1,3-Hexanediol (C) -1.0 -3.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.0 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.9 -3.2 compare
pH Growth at pH7 and (C) D-Glucose -0.9 -1.3 compare
carbon source Valeric (C) -0.8 -1.9 compare
carbon source Valerolactone (C) -0.7 -1.9 compare
pH pH 5 -0.7 -1.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.7 -1.8 compare
pH Growth at pH7 and (C) Trisodium citrate -0.7 -2.2 compare
nitrogen source NAG (N); with MOPS -0.7 -1.3 compare
temperature shift Temperature shift 10_to_30 -0.7 -2.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.7 -1.9 compare
stress R2A with Fusaric 240 ug/mL -0.6 -1.2 compare
carbon source 3-Hydroxypropionate (C) -0.6 -3.6 compare
phage P. put South MOI 0.1 -0.6 -2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.6 -2.1 compare
nitrogen source D-2-Aminobutyric (N) -0.6 -1.6 compare
pH pH 7 -0.6 -1.9 compare
pH Growth at pH6 and (C) Trisodium citrate +0.6 +1.8 compare