Fitness data for PP_0077 in Pseudomonas putida KT2440

choline-sulfatase
SEED: Choline-sulfatase (EC 3.1.6.6)
KEGG: choline-sulfatase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
nitrogen source NAG (N); with MOPS -0.5 -2.0 compare
carbon source Crotonic (C) -0.4 -2.3 compare
carbon source D-Glucose (C) -0.4 -2.3 compare
stress R2A with Fusaric 240 ug/mL -0.4 -2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.4 -1.9 compare
pH Growth at pH9 and (C) Trisodium citrate -0.4 -1.8 compare
carbon source ferulate (C); with MOPS -0.4 -1.9 compare
nitrogen source nitrate (N) -0.4 -1.9 compare
carbon source carbon source D-Glucose 55.5 mM -0.3 -1.9 compare
phage P. put PUT 10 MOI 10 -0.3 -2.2 compare
nitrogen source nitrogen source nitrite 1mM -0.3 -1.7 compare
pH Growth at pH7 and (C) Trisodium citrate -0.3 -1.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.3 -1.6 compare
nitrogen source Propiolactam (N) -0.3 -1.9 compare
pH Growth at pH6 and (C) D-Glucose -0.3 -1.5 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.3 -2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs +0.3 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.3 +2.0 compare
micoeukaryotes Acanthamoeba sp., muxed culture-1 +0.3 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +2.1 compare