Fitness data for PP_0022 in Pseudomonas putida KT2440

hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 3.4)


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group condition fitness t score  
phage P. putida South MOI 10 -5.2 -1.5 compare
temperature Growth at 25C -5.1 -1.2 compare
temperature Growth at 30C; with MOPS -5.0 -1.1 compare
pH Growth at pH6 and (C) D-Glucose -4.9 -1.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -4.8 -1.1 compare
temperature shift Temperature shift 30_to_21; with MOPS -4.8 -1.2 compare
pH Growth at pH7 and (C) Trisodium citrate -4.8 -1.1 compare
temperature shift Temperature shift 30_to_25 -4.8 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -4.6 -1.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -4.5 -1.0 compare
phage P. putida Sci small MOI 0.1 -4.5 -0.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -4.4 -1.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -4.2 -2.0 compare
nitrogen source no extra (N); with MOPS -4.1 -1.5 compare
mixed community Putida_ML5X with Paraburkholderia sabiae T6SS mutant -3.7 -1.4 compare
temperature Growth at 30C; with MOPS -3.6 -1.5 compare
pH Growth at pH6 and (C) D-Glucose -3.5 -1.7 compare
pH D-Glucose (C) pH 6 -3.5 -1.0 compare
temperature shift Temperature shift 30_to_25 -3.4 -1.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +3.4 +5.1 compare