Fitness data for PP_0002 in Pseudomonas putida KT2440

probable chromosome partition protein
SEED: Chromosome (plasmid) partitioning protein ParA
KEGG: chromosome partitioning protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.2)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.9 -5.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.7 -5.1 compare
carbon source Acetate Carbon Source (20mM) -1.4 -7.1 compare
carbon source 5-Hydroxydodecanoate (C) -1.4 -3.9 compare
carbon source Delta-Dodecalactone (C) -1.4 -5.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -1.4 -4.9 compare
carbon source 3-methyl-1-butanol 0.25 vol% (C) -1.3 -4.5 compare
stress Growth with Chloride 200 mM; with MOPS -1.3 -3.4 compare
carbon source Butyl stearate (C) -1.3 -5.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.3 -5.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -1.3 -4.1 compare
carbon source Tween 20 (C) -1.3 -3.6 compare
carbon source Valeric (C) -1.3 -5.0 compare
carbon source 3-Hydroxydecanoic (C) -1.2 -3.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -1.2 -4.7 compare
carbon source acetate (C) -1.2 -3.3 compare
reactor_pregrowth Adaptation in M9 media timecourse 2; day 3 -1.2 -4.9 compare
carbon source 5-Hydroxydodecanoate (C) -1.2 -3.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -1.2 -3.7 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v oleyl alcohol overlay +1.7 +4.7 compare