Fitness data for PS417_04295 in Pseudomonas simiae WCS417

peptidase PmbA
SEED: TldE protein, part of TldE/TldD proteolytic complex
KEGG: PmbA protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.3 -5.3 compare
motility outer cut, LB soft agar motility assay -1.2 -6.2 compare
soil soil sample 6; outgrowth in LB -1.1 -5.2 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -1.1 -4.1 compare
motility outer cut, LB soft agar motility assay -1.0 -5.3 compare
motility inner cut, LB soft agar motility assay -1.0 -5.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.0 -3.4 compare
motility outer cut, LB soft agar motility assay -0.9 -5.0 compare
seeds Growth on radish seeds for 72 hours -0.9 -4.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.9 -3.7 compare
motility inner cut, LB soft agar motility assay -0.9 -4.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.9 -3.1 compare
soil soil sample 3; outgrowth in LB -0.9 -3.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.9 -3.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.9 -4.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.8 -3.4 compare
motility inner cut, LB soft agar motility assay -0.8 -3.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -0.8 -3.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.8 -2.8 compare
solid stress Fraxetin 3 mM; solid stress -0.8 -2.8 compare