Fitness data for PS417_04210 in Pseudomonas simiae WCS417

Galactarate dehydratase (EC 4.2.1.42) (from data)
Original annotation: galactarate dehydrogenase
SEED: D-galactarate dehydratase (EC 4.2.1.42)
KEGG: galactarate dehydratase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
carbon source D-Galacturonic Acid (C) -1.6 -5.7 compare
carbon source D-Galacturonic Acid (C) -1.4 -3.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.9 -2.3 compare
phage JP1 MOI 10 -0.9 -2.2 compare
solid stress Fraxetin 3 mM; solid stress -0.7 -1.8 compare
stress Gentamicin 0.008 mg/ml -0.7 -2.0 compare
carbon source L-Valine (C) -0.7 -1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.6 -1.7 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.6 -2.4 compare
stress R2A with Fusaric 120 ug/mL -0.6 -2.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Threonine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.6 -2.5 compare
supernatant control Vogels_fungal_media 0.1X -0.6 -1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.6 +2.3 compare
solid stress 80% Methanol 1 mM; solid stress +0.6 +2.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.6 +2.8 compare
solid stress 80% Methanol 2 mM; solid stress +0.6 +2.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.7 +1.7 compare
liquid stress Fraxetin 2 mM; liquid stress +0.7 +2.6 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.8 +2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.8 +3.2 compare