Fitness data for PS417_04175 in Pseudomonas simiae WCS417

peptidase
SEED: Stringent starvation protein B
KEGG: stringent starvation protein B

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
carbon source octanoate (C) -1.1 -3.8 compare
phage Wcs_1 -0.9 -3.2 compare
carbon source octanoate (C) -0.8 -2.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.8 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.8 -2.3 compare
motility inner cut, LB soft agar motility assay -0.7 -2.7 compare
soil soil sample 5; outgrowth in LB -0.7 -1.4 compare
phage P. simiae OR1 MOI 0.1 -0.7 -2.7 compare
liquid stress Scopoletin 3 mM; liquid stress -0.7 -1.4 compare
motility inner cut, LB soft agar motility assay -0.7 -2.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -1.9 compare
phage P. simiae ORA MOI 10 -0.6 -1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -1.8 compare
stress Doxycycline hyclate 0.001 mg/ml +0.6 +1.7 compare
phage JP1 MOI 10 +0.7 +2.2 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.8 +1.8 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.8 +2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.8 +1.7 compare
stress Neomycin 0.04 mg/ml +0.9 +3.2 compare