Fitness data for PS417_03940 in Pseudomonas simiae WCS417

membrane protein
SEED: AmpE protein
KEGG: AmpE protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
stress R2A with Polymyxin B sulfate 0.002 mg/ml -1.0 -3.6 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.9 -2.4 compare
stress R2A with Fusaric 120 ug/mL -0.8 -3.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.8 -1.8 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.7 -1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +1.8 compare
soil soil sample 8; outgrowth in LB +0.7 +2.1 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.8 +1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB +0.8 +2.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +0.8 +3.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.8X; growth supplemented with 0.4X LB +0.8 +3.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.8 +3.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.8 +2.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB +0.8 +3.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.9 +2.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB +0.9 +3.3 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB +0.9 +3.9 compare
supernatant control Vogels_fungal_media 0.1X +1.0 +4.3 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.0 +1.6 compare
agar plate interaction control Taped volatile agar plate with no fungus +1.1 +3.3 compare