Fitness data for PS417_03790 in Pseudomonas simiae WCS417

pilus assembly protein PilW
SEED: Type IV fimbrial biogenesis protein PilW
KEGG: type IV pilus assembly protein PilW

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
carbon source L-Valine (C) -1.4 -2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.3 -1.3 compare
carbon source L-Valine (C) -1.0 -1.5 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -1.0 -1.1 compare
stress methylglyoxal 0.032 vol% -0.9 -1.2 compare
phage P. simiae Grant Run MOI 0.1 -0.9 -1.8 compare
phage P. simiae OR1 MOI 0.1 -0.9 -1.8 compare
seeds Growth on radish seeds for 24 hours -0.8 -1.0 compare
phage P. simiae ORA MOI 0.1 -0.8 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.8 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.8 -1.5 compare
seeds Growth on radish seeds for 72 hours -0.7 -1.1 compare
soil soil sample 2; outgrowth in LB +0.8 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.8 +1.1 compare
carbon source 2'-Deoxyinosine 5 mM (C) +0.8 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.9 +2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.9 +1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.9 +2.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.0 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.5 +1.6 compare