Fitness data for PS417_03780 in Pseudomonas simiae WCS417

general secretion pathway protein GspH
SEED: Type IV fimbrial biogenesis protein FimT
KEGG: type IV fimbrial biogenesis protein FimT

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
stress methylglyoxal 0.032 vol% -1.1 -1.5 compare
rhizosphere rhizosphere sample 8; outgrowth in LB -1.1 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.0 -2.0 compare
agar plate interaction control Taped volatile agar plate with no fungus -1.0 -0.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.9 -2.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.8 -0.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.8 -1.0 compare
solid stress 80% Methanol 3 mM; solid stress +0.8 +3.1 compare
carbon source 2'-Deoxyinosine 5 mM (C) +0.9 +1.8 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.9 +2.5 compare
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) +0.9 +2.5 compare
ecofab LB in EcoFAB_3.5mL +0.9 +1.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.0 +1.5 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +1.0 +2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.0 +2.1 compare
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) +1.0 +2.2 compare
phage JP1 MOI 10 +1.0 +2.5 compare
phage Wcs_1 +1.2 +1.8 compare
carbon source L-Valine (C) +1.4 +2.3 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.6 +1.8 compare