Fitness data for PS417_00315 in Pseudomonas simiae WCS417

MFS transporter
SEED: Cytochrome c oxidase polypeptide III (EC 1.9.3.1)
KEGG: cytochrome c oxidase subunit III

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
soil soil sample 6; outgrowth in LB -2.1 -3.2 compare
soil soil sample 7; outgrowth in LB -2.1 -2.8 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -1.7 -2.5 compare
soil soil sample 2; outgrowth in LB -1.5 -1.8 compare
soil soil sample 8; outgrowth in LB -1.4 -2.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.2 -2.3 compare
soil soil sample 5; outgrowth in LB -1.2 -1.4 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -1.2 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -1.1 -2.4 compare
soil soil sample 4; outgrowth in LB -1.1 -1.8 compare
rhizosphere rhizosphere sample 8; outgrowth in LB -1.0 -2.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.8X; growth supplemented with 0.4X LB -0.8 -2.6 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.7 -2.2 compare
soil soil sample 3; outgrowth in LB -0.7 -1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.8 +1.3 compare
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) +0.8 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.8 +1.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.8 +1.7 compare
carbon source L-Valine (C) +1.1 +1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +1.2 +2.1 compare