Fitness data for PS417_03025 in Pseudomonas simiae WCS417

penicillin-binding protein 1C
SEED: Penicillin-insensitive transglycosylase (EC 2.4.2.-) & transpeptidase PBP-1C
KEGG: penicillin-binding protein 1C

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
supernatant Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x -0.6 -2.9 compare
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x -0.6 -3.4 compare
soil soil sample 2; outgrowth in LB -0.6 -1.9 compare
supernatant RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x -0.5 -2.4 compare
soil soil sample 5; outgrowth in LB -0.5 -2.1 compare
rhizosphere rhizosphere sample 8; outgrowth in LB -0.5 -2.0 compare
exudates RCH2_defined_glucose with Brachypodium distachyon 13-day exudates 1x -0.5 -2.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -1.9 compare
carbon source RCH2_defined_glucose with MS_media 1x -0.5 -3.1 compare
solid stress Scopoletin 2 mM; solid stress +0.5 +2.8 compare
solid stress Fraxetin 0.5 mM; solid stress +0.5 +3.2 compare
carbon source 2-Deoxy-D-Ribose 10 mM (C) +0.5 +1.9 compare
solid stress 80% Methanol 2 mM; solid stress +0.5 +3.3 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.5 +2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.5 +0.9 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.6 +2.3 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X +0.6 +3.6 compare
carbon source 2'-Deoxyinosine 5 mM (C) +0.6 +2.7 compare
rhizosphere rhizosphere sample 1; outgrowth in LB +0.6 +2.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.6 compare