Fitness data for PS417_02870 in Pseudomonas simiae WCS417

TonB-dependent receptor
SEED: Outer membrane receptor proteins, mostly Fe transport
KEGG: iron complex outermembrane recepter protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
stress R2A with Polymyxin B sulfate 0.003 mg/ml -2.1 -5.8 compare
temperature LB_noSalt 30C -1.8 -6.0 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -1.5 -5.5 compare
stress NaCl stress 250 mM -1.4 -5.0 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -1.3 -4.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.3 -5.2 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -1.3 -5.1 compare
stress NaCl stress 25 mM -1.2 -4.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.2 -5.1 compare
stress NaCl stress 250 mM -1.2 -4.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.2 -5.6 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -1.1 -2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.1 -3.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -1.0 -4.9 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -1.0 -4.3 compare
solid stress Scopoletin 2 mM; solid stress -1.0 -4.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.9 -3.1 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.9 -3.5 compare
solid stress Scopoletin 2 mM; solid stress -0.9 -4.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.1 +2.7 compare