Fitness data for PS417_28535 in Pseudomonas simiae WCS417

TonB-dependent receptor
SEED: Ferrichrome-iron receptor

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.4 -2.6 compare
phage P. simiae OR Antrim MOI 0.1 -0.3 -2.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.3 -2.1 compare
carbon source Carbon source L-Citrulline 5 mM -0.3 -2.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -0.3 -2.2 compare
nitrogen source Urea (N) -0.2 -2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.2 -1.3 compare
stress LB_noSalt with Chloride 1100 mM +0.2 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.2 +1.7 compare
lb LB_control +0.3 +2.4 compare
seeds Growth on radish seeds for 72 hours +0.3 +1.9 compare
rhizosphere rhizosphere sample 1; outgrowth in LB +0.3 +1.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +2.1 compare
soil soil sample 6; outgrowth in LB +0.3 +1.9 compare
rhizosphere rhizosphere sample 8; outgrowth in LB +0.4 +2.3 compare
soil soil sample 4; outgrowth in LB +0.4 +2.0 compare
soil soil sample 5; outgrowth in LB +0.4 +2.3 compare
root root sample 6; outgrowth in LB +0.4 +2.1 compare
seeds Growth on radish seeds for 72 hours +0.5 +3.0 compare
soil soil sample 8; outgrowth in LB +0.5 +3.0 compare