Fitness data for PS417_28450 in Pseudomonas simiae WCS417

XRE family transcriptional regulator
SEED: Transcriptional regulator of glmS gene, DeoR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.2)


Add gene:

Or see all 552 experiments or choose conditions

group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -4.0 -2.3 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -3.2 -2.5 compare
root root sample 6; outgrowth in LB -2.0 -1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.9 -1.6 compare
phage Wcs_1 -1.8 -2.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Phenylalanine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.5 -3.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.4 -0.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Aspartic Acid; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.3 -2.2 compare
stress Spectinomycin 0.4 mg/ml -1.2 -2.1 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +1.2 +2.6 compare
stress 1-ethyl-3-methylimidazolium chloride 200 mM +1.3 +3.2 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB +1.3 +2.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X +1.3 +3.0 compare
phage P. simiae OR Antrim MOI 10 +1.3 +1.7 compare
stress Cisplatin 0.01 mg/ml +1.4 +1.4 compare
stress Dimethyl Sulfoxide 5 vol% +1.4 +1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +1.5 +3.3 compare
supernatant Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x +1.5 +2.4 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x +1.5 +3.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.5 +1.9 compare