Fitness data for PS417_28315 in Pseudomonas simiae WCS417

zinc ABC transporter permease
SEED: Zinc ABC transporter, inner membrane permease protein ZnuB
KEGG: zinc/manganese transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
agar plate interaction control Parafilmed volatile agar plate with no fungus -2.6 -3.4 compare
phage JP1 MOI 0.1 -1.7 -2.4 compare
motility inner cut, LB soft agar motility assay -1.1 -2.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.0 -1.7 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -1.0 -1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.0 -1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.0 -2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.0 -1.4 compare
carbon source 2-Deoxy-D-Ribose (C) -0.9 -1.8 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x -0.9 -1.8 compare
rhizosphere rhizosphere sample 1; outgrowth in LB +0.9 +2.0 compare
no phage control Time6-nophage +0.9 +2.0 compare
seeds Growth on radish seeds for 72 hours +0.9 +1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.9 +1.7 compare
carbon source Trisodium citrate (C) +1.0 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +1.1 +1.4 compare
phage JP1 MOI 10 +1.2 +1.3 compare
carbon source octanoate (C) +1.2 +3.6 compare
seeds Growth on radish seeds for 24 hours +1.2 +2.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.3 +1.8 compare