Fitness data for PS417_28230 in Pseudomonas simiae WCS417

transcriptional regulator
SEED: Phosphogluconate repressor HexR, RpiR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.8)


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group condition fitness t score  
soil soil sample 7; outgrowth in LB -3.7 -3.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -3.2 -3.5 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -3.0 -3.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.6 -2.5 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -2.6 -2.5 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -2.5 -2.5 compare
soil soil sample 2; outgrowth in LB -2.5 -2.5 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -2.3 -2.6 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -2.3 -2.8 compare
phage Wcs_1 -2.3 -2.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.1 -2.3 compare
solid stress Fraxetin 3 mM; solid stress -2.0 -3.1 compare
soil soil sample 5; outgrowth in LB -1.9 -2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.9 -3.8 compare
carbon source D-Glucose (C) -1.8 -2.8 compare
carbon source NAG (C) +1.9 +4.6 compare
carbon source NAG (C) +2.1 +5.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +2.1 +2.2 compare
stress Phosphomycin 0.002 mg/ml +2.2 +5.8 compare
stress Phosphomycin 0.003 mg/ml +2.3 +6.5 compare