Fitness data for PS417_28170 in Pseudomonas simiae WCS417

transcriptional regulator
SEED: Transcriptional regulator
KEGG: transcriptional regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
root root sample 6; outgrowth in LB -1.3 -2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.2 -1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.1 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.1 -2.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.1 -2.2 compare
agar plate interaction control Taped volatile agar plate with no fungus -1.0 -1.6 compare
carbon source Carbon source D-Mannitol 5 mM -1.0 -2.9 compare
seeds Growth on radish seeds for 72 hours -0.9 -2.2 compare
phage P. simiae OR Antrim MOI 1 -0.9 -2.1 compare
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) -0.9 -2.6 compare
carbon source Carbon source D-Mannitol 10 mM -0.9 -2.6 compare
solid stress Scopoletin 2 mM; solid stress -0.8 -2.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.8 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.8 -2.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.7 -1.1 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.8 +2.7 compare
supernatant Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x +0.8 +2.1 compare
carbon source RCH2_defined_glucose with MS_media 1x +0.8 +3.5 compare
phage P. simiae ORA MOI 1 +0.8 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.9 +1.1 compare